Publications

2017

2016

2015

  • Symmetries of Automata

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  • Algebraic double cut and join - A group-theoretic approach to the operator on multichromosomal genomes

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  • Symmetry structure in discrete models of biochemical systems: natural subsystems and the weak control hierarchy in a new model of computation driven by interactions

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  • Computational Understanding and Manipulation of Symmetries

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2014

2013

  • Exploring the concept of interaction computing through the discrete algebraic analysis of the Belousov–Zhabotinsky reaction

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2012

  • BIOMICS Project: Biological and Mathematical Basis of Interaction Computing

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  • Algebraic Analysis of the Computation in the Belousov-Zhabotinksy Reaction

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2011

  • How to Solve it? - The Tsumego Session

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  • Symmetries of Automata (extended abstract)

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  • Algorithms for the Efficient Calculation of the Holonomy Decomposition (extended abstract)

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  • Book Review: Applications of Automata Theory and Algebra via the Mathematical Theory of Complexity to Biology, Physics, Psychology, Philosophy, and Games by John Rhodes

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2010

  • On the Skeleton of a Transformation Semigroup

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  • On Straight Words and Minimal Permutators in Finite Transformation Semigroups

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  • Transformation Semigroups as Constructive Dynamical Spaces

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2008

  • Automatic Analysis of Computation in BioChemical Reactions

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  • Algebraic Properties of Automata Associated to Petri Nets and Applications to Computation in Intermediary Metabolism

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  • Hierachical Coordinate Systems for Understanding Complexity and its Evolution with Applications to Genetic Regulatory Networks

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2007

  • Finite residue class rings of integers modulo $n$ from the viewpoint of global semigroup theory

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  • [HUN] Mesterséges élet és megértés

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  • Mirroring, Deixis, and Interaction Topology in the Emergence of Shared Vocabularies

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2006

  • Making Sense of the Sensory Data - Coordinate Systems by Hierarchical Decomposition

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2005

  • Cycle Structure in Automata and the Holonomy Decomposition

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2004

  • [HUN] A spirálok szépségéről

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  • Algebraic Hierarchical Decomposition of Finite State Automata: Comparison of Implementations for Krohn-Rhodes Theory

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2003

  • Evolvability of the Genotype-Phenotype Relation in Populations of Self-Replicating Digital Organisms in a Tierra-like System

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  • [HUN] Digitális evolúció

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1997

  • [HUN] A lét értelmére vonatkozó kérdés ismételt felvetése - Túl misztikán és logikán

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